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Plot signature score over pseudotime

Source: R/plot_pseudotime_score.R
plot_pseudotime_score.Rd

Plot signature score over pseudotime

Usage

plot_pseudotime_score(
  score,
  signature = NULL,
  pseudotime = NULL,
  lineage = NULL,
  smooth = TRUE,
  point_size = 1.1,
  alpha = 0.55,
  palette = "gleam_discrete",
  theme_params = list()
)

Arguments

score

gleam_score object.

signature

Signature name.

pseudotime

Pseudotime source.

lineage

Optional lineage source for coloring.

smooth

Add smoothing line.

point_size

Point size.

alpha

Point alpha.

palette

Discrete palette for lineages.

theme_params

Optional list passed to gleam_theme().

Value

A ggplot object.