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Plot signature score on spatial coordinates

Usage

plot_spatial_score(
  score,
  signature,
  coords = NULL,
  object = NULL,
  image = NULL,
  palette = "gleam_continuous",
  split.by = NULL,
  point_size = 1.4,
  alpha = 0.9,
  theme_params = list()
)

Arguments

score

gleam_score object.

signature

Signature name.

coords

Spatial coordinates data.frame with x/y.

object

Optional Seurat spatial object for in-slice plotting.

image

Optional raster/image object. If provided, used as background.

palette

Continuous palette name or colors.

split.by

Optional metadata split variable.

point_size

Point size.

alpha

Point alpha.

theme_params

Optional list passed to gleam_theme().

Value

A ggplot object.