Volcano plot for differential signatures — plot_volcano • GLEAM

Volcano plot for differential signatures

Usage

plot_volcano(
  x,
  p_col = "p_adj",
  effect_col = "effect_size",
  sig_thresh = 0.05,
  point_size = 1.8,
  alpha = 0.8,
  theme_params = list()
)

Arguments

x: gleam_test object or result data.frame.
p_col: P-value column name.
effect_col: Effect size column name.
sig_thresh: Significance threshold for adjusted p-value.
point_size: Point size.
alpha: Point alpha.
theme_params: Optional list passed to gleam_theme().

Value

A ggplot object.