Build and save example data from raw Human Lymph Node files — build_aegis_example_data • AEGIS

Build and save example data from raw Human Lymph Node files

Usage

build_aegis_example_data(
  raw_dir = ".",
  output_file = file.path("data", "aegis_example.rda"),
  object_name = "aegis_example",
  max_spots = 1200L,
  seed = 42
)

Arguments

raw_dir: Directory containing authoritative raw files.
output_file: Path to .rda output file.
object_name: Name of the object saved in .rda.
max_spots: Maximum number of spots to keep for package-size control.
seed: Random seed for reproducible spot subsetting.

Value

Invisibly returns the saved Seurat object.